Source code for kornia.augmentation.container.augment

import warnings
from itertools import zip_longest
from typing import Any, Dict, List, Optional, Tuple, Union, cast

from torch import Tensor

from kornia.augmentation import (
    AugmentationBase3D,
    GeometricAugmentationBase2D,
    IntensityAugmentationBase2D,
    RandomErasing,
)
from kornia.augmentation.base import _AugmentationBase
from kornia.augmentation.container.base import SequentialBase
from kornia.augmentation.container.image import ImageSequential, ParamItem
from kornia.augmentation.container.patch import PatchSequential
from kornia.augmentation.container.utils import ApplyInverse
from kornia.augmentation.container.video import VideoSequential
from kornia.constants import DataKey, Resample
from kornia.geometry.boxes import Boxes
from kornia.utils import eye_like

__all__ = ["AugmentationSequential"]


[docs]class AugmentationSequential(ImageSequential): r"""AugmentationSequential for handling multiple input types like inputs, masks, keypoints at once. .. image:: https://kornia-tutorials.readthedocs.io/en/latest/_images/data_augmentation_sequential_5_1.png :width: 49 % .. image:: https://kornia-tutorials.readthedocs.io/en/latest/_images/data_augmentation_sequential_7_0.png :width: 49 % Args: *args: a list of kornia augmentation modules. data_keys: the input type sequential for applying augmentations. Accepts "input", "mask", "bbox", "bbox_xyxy", "bbox_xywh", "keypoints". same_on_batch: apply the same transformation across the batch. If None, it will not overwrite the function-wise settings. keepdim: whether to keep the output shape the same as input (True) or broadcast it to the batch form (False). If None, it will not overwrite the function-wise settings. random_apply: randomly select a sublist (order agnostic) of args to apply transformation. If int, a fixed number of transformations will be selected. If (a,), x number of transformations (a <= x <= len(args)) will be selected. If (a, b), x number of transformations (a <= x <= b) will be selected. If True, the whole list of args will be processed as a sequence in a random order. If False, the whole list of args will be processed as a sequence in original order. extra_args: to control the behaviour for each datakeys. By default, masks are handled by nearest interpolation strategies. .. note:: Mix augmentations (e.g. RandomMixUp, RandomCutMix) can only be working with "input" data key. It is not clear how to deal with the conversions of masks, bounding boxes and keypoints. .. note:: See a working example `here <https://kornia-tutorials.readthedocs.io/en/ latest/data_augmentation_sequential.html>`__. Examples: >>> import kornia >>> input = torch.randn(2, 3, 5, 6) >>> mask = torch.ones(2, 3, 5, 6) >>> bbox = torch.tensor([[ ... [1., 1.], ... [2., 1.], ... [2., 2.], ... [1., 2.], ... ]]).expand(2, -1, -1) >>> points = torch.tensor([[[1., 1.]]]).expand(2, -1, -1) >>> aug_list = AugmentationSequential( ... kornia.augmentation.ColorJiggle(0.1, 0.1, 0.1, 0.1, p=1.0), ... kornia.augmentation.RandomAffine(360, p=1.0), ... data_keys=["input", "mask", "bbox", "keypoints"], ... same_on_batch=False, ... random_apply=10, ... ) >>> out = aug_list(input, mask, bbox, points) >>> [o.shape for o in out] [torch.Size([2, 3, 5, 6]), torch.Size([2, 3, 5, 6]), torch.Size([2, 4, 2]), torch.Size([2, 1, 2])] >>> # apply the exact augmentation again. >>> out_rep = aug_list(input, mask, bbox, points, params=aug_list._params) >>> [(o == o_rep).all() for o, o_rep in zip(out, out_rep)] [tensor(True), tensor(True), tensor(True), tensor(True)] >>> # inverse the augmentations >>> out_inv = aug_list.inverse(*out) >>> [o.shape for o in out_inv] [torch.Size([2, 3, 5, 6]), torch.Size([2, 3, 5, 6]), torch.Size([2, 4, 2]), torch.Size([2, 1, 2])] This example demonstrates the integration of VideoSequential and AugmentationSequential. >>> import kornia >>> input = torch.randn(2, 3, 5, 6)[None] >>> mask = torch.ones(2, 3, 5, 6)[None] >>> bbox = torch.tensor([[ ... [1., 1.], ... [2., 1.], ... [2., 2.], ... [1., 2.], ... ]]).expand(2, -1, -1)[None] >>> points = torch.tensor([[[1., 1.]]]).expand(2, -1, -1)[None] >>> aug_list = AugmentationSequential( ... VideoSequential( ... kornia.augmentation.ColorJiggle(0.1, 0.1, 0.1, 0.1, p=1.0), ... kornia.augmentation.RandomAffine(360, p=1.0), ... ), ... data_keys=["input", "mask", "bbox", "keypoints"] ... ) >>> out = aug_list(input, mask, bbox, points) >>> [o.shape for o in out] [torch.Size([1, 2, 3, 5, 6]), torch.Size([1, 2, 3, 5, 6]), torch.Size([1, 2, 4, 2]), torch.Size([1, 2, 1, 2])] Perform ``OneOf`` transformation with ``random_apply=1`` and ``random_apply_weights`` in ``AugmentationSequential``. >>> import kornia >>> input = torch.randn(2, 3, 5, 6)[None] >>> mask = torch.ones(2, 3, 5, 6)[None] >>> bbox = torch.tensor([[ ... [1., 1.], ... [2., 1.], ... [2., 2.], ... [1., 2.], ... ]]).expand(2, -1, -1)[None] >>> points = torch.tensor([[[1., 1.]]]).expand(2, -1, -1)[None] >>> aug_list = AugmentationSequential( ... VideoSequential( ... kornia.augmentation.RandomAffine(360, p=1.0), ... ), ... VideoSequential( ... kornia.augmentation.ColorJiggle(0.1, 0.1, 0.1, 0.1, p=1.0), ... ), ... data_keys=["input", "mask", "bbox", "keypoints"], ... random_apply=1, ... random_apply_weights=[0.5, 0.3] ... ) >>> out = aug_list(input, mask, bbox, points) >>> [o.shape for o in out] [torch.Size([1, 2, 3, 5, 6]), torch.Size([1, 2, 3, 5, 6]), torch.Size([1, 2, 4, 2]), torch.Size([1, 2, 1, 2])] """ def __init__( self, *args: Union[_AugmentationBase, ImageSequential], data_keys: List[Union[str, int, DataKey]] = [DataKey.INPUT], same_on_batch: Optional[bool] = None, return_transform: Optional[bool] = None, keepdim: Optional[bool] = None, random_apply: Union[int, bool, Tuple[int, int]] = False, random_apply_weights: Optional[List[float]] = None, extra_args: Dict[DataKey, Dict[str, Any]] = { DataKey.MASK: dict( resample=Resample.NEAREST, align_corners=True ) } ) -> None: super().__init__( *args, same_on_batch=same_on_batch, return_transform=return_transform, keepdim=keepdim, random_apply=random_apply, random_apply_weights=random_apply_weights, ) self.data_keys = [DataKey.get(inp) for inp in data_keys] if not all(in_type in DataKey for in_type in self.data_keys): raise AssertionError(f"`data_keys` must be in {DataKey}. Got {data_keys}.") if self.data_keys[0] != DataKey.INPUT: raise NotImplementedError(f"The first input must be {DataKey.INPUT}.") self.contains_video_sequential: bool = False self.contains_3d_augmentation: bool = False for arg in args: if isinstance(arg, PatchSequential) and not arg.is_intensity_only(): warnings.warn("Geometric transformation detected in PatchSeqeuntial, which would break bbox, mask.") if isinstance(arg, VideoSequential): self.contains_video_sequential = True # NOTE: only for images are supported for 3D. if isinstance(arg, AugmentationBase3D): self.contains_3d_augmentation = True self._transform_matrix: Optional[Tensor] = None self.extra_args = extra_args def identity_matrix(self, input: Tensor) -> Tensor: """Return identity matrix.""" if self.contains_3d_augmentation: return eye_like(4, input) else: return eye_like(3, input) @property def transform_matrix(self,) -> Optional[Tensor]: return self._transform_matrix
[docs] def inverse( # type: ignore self, *args: Tensor, params: Optional[List[ParamItem]] = None, data_keys: Optional[List[Union[str, int, DataKey]]] = None, ) -> Union[Tensor, List[Tensor]]: """Reverse the transformation applied. Number of input tensors must align with the number of``data_keys``. If ``data_keys`` is not set, use ``self.data_keys`` by default. """ if data_keys is None: data_keys = cast(List[Union[str, int, DataKey]], self.data_keys) _data_keys: List[DataKey] = [DataKey.get(inp) for inp in data_keys] if len(args) != len(data_keys): raise AssertionError( "The number of inputs must align with the number of data_keys, " f"Got {len(args)} and {len(data_keys)}." ) args = self._arguments_preproc(*args, data_keys=_data_keys) if params is None: if self._params is None: raise ValueError( "No parameters available for inversing, please run a forward pass first " "or passing valid params into this function." ) params = self._params outputs: List[Tensor] = [None] * len(data_keys) # type: ignore for idx, (arg, dcate) in enumerate(zip(args, data_keys)): if DataKey.INPUT in self.extra_args: extra_args = self.extra_args[DataKey.INPUT] else: extra_args = {} if dcate == DataKey.INPUT and isinstance(arg, (tuple, list)): input, _ = arg # ignore the transformation matrix whilst inverse # Using tensors straight-away elif isinstance(arg, (Boxes,)): input = arg.data # all boxes are in (B, N, 4, 2) format now. else: input = arg for (name, module), param in zip_longest(list(self.get_forward_sequence(params))[::-1], params[::-1]): if isinstance(module, (_AugmentationBase, ImageSequential)): param = params[name] if name in params else param else: param = None if isinstance(module, IntensityAugmentationBase2D) and dcate in DataKey \ and not isinstance(module, RandomErasing): pass # Do nothing elif isinstance(module, ImageSequential) and module.is_intensity_only() and dcate in DataKey: pass # Do nothing elif isinstance(module, VideoSequential) and dcate not in [DataKey.INPUT, DataKey.MASK]: batch_size: int = input.size(0) input = input.view(-1, *input.shape[2:]) input = ApplyInverse.inverse_by_key(input, module, param, dcate, extra_args=extra_args) input = input.view(batch_size, -1, *input.shape[1:]) elif isinstance(module, PatchSequential): raise NotImplementedError("Geometric involved PatchSequential is not supported.") elif isinstance(module, (AugmentationSequential)) \ and dcate in DataKey: # AugmentationSequential shall not take the extra_args arguments. input = ApplyInverse.inverse_by_key(input, module, param, dcate) elif isinstance(module, (GeometricAugmentationBase2D, ImageSequential, RandomErasing)) \ and dcate in DataKey: input = ApplyInverse.inverse_by_key(input, module, param, dcate, extra_args=extra_args) elif isinstance(module, (SequentialBase,)): raise ValueError(f"Unsupported Sequential {module}.") else: raise NotImplementedError(f"data_key {dcate} is not implemented for {module}.") if isinstance(arg, (Boxes,)): arg._data = input outputs[idx] = arg.to_tensor() else: outputs[idx] = input if len(outputs) == 1 and isinstance(outputs, (tuple, list)): return outputs[0] return outputs
def __packup_output__( # type: ignore self, output: List[Tensor], label: Optional[Tensor] = None ) -> Union[ Tensor, Tuple[Tensor, Optional[Tensor]], List[Tensor], Tuple[List[Tensor], Optional[Tensor]], ]: if len(output) == 1 and isinstance(output, (tuple, list)) and self.return_label: return output[0], label if len(output) == 1 and isinstance(output, (tuple, list)): return output[0] if self.return_label: return output, label return output def _validate_args_datakeys(self, *args: Tensor, data_keys: List[DataKey]): if len(args) != len(data_keys): raise AssertionError( f"The number of inputs must align with the number of data_keys. Got {len(args)} and {len(data_keys)}." ) # TODO: validate args batching, and its consistency def _arguments_preproc(self, *args: Tensor, data_keys: List[DataKey]): inp: List[Any] = [] for arg, dcate in zip(args, data_keys): if DataKey.get(dcate) in [DataKey.INPUT, DataKey.MASK, DataKey.KEYPOINTS]: inp.append(arg) elif DataKey.get(dcate) in [DataKey.BBOX, DataKey.BBOX_XYXY, DataKey.BBOX_XYWH]: if DataKey.get(dcate) in [DataKey.BBOX]: mode = "vertices_plus" elif DataKey.get(dcate) in [DataKey.BBOX_XYXY]: mode = "xyxy" elif DataKey.get(dcate) in [DataKey.BBOX_XYWH]: mode = "xywh" else: raise ValueError(f"Unsupported mode `{DataKey.get(dcate).name}`.") inp.append(Boxes.from_tensor(arg, mode=mode)) # type: ignore else: raise NotImplementedError(f"input type of {dcate} is not implemented.") return inp
[docs] def forward( # type: ignore self, *args: Tensor, label: Optional[Tensor] = None, params: Optional[List[ParamItem]] = None, data_keys: Optional[List[Union[str, int, DataKey]]] = None, ) -> Union[ Tensor, Tuple[Tensor, Optional[Tensor]], List[Tensor], Tuple[List[Tensor], Optional[Tensor]], ]: """Compute multiple tensors simultaneously according to ``self.data_keys``.""" _data_keys: List[DataKey] if data_keys is None: _data_keys = self.data_keys else: _data_keys = [DataKey.get(inp) for inp in data_keys] self.data_keys = _data_keys self._validate_args_datakeys(*args, data_keys=_data_keys) args = self._arguments_preproc(*args, data_keys=_data_keys) if params is None: # image data must exist if params is not provided. if DataKey.INPUT in _data_keys: _input = args[_data_keys.index(DataKey.INPUT)] inp = _input if isinstance(inp, (tuple, list)): raise ValueError(f"`INPUT` should be a tensor but `{type(inp)}` received.") # A video input shall be BCDHW while an image input shall be BCHW if self.contains_video_sequential or self.contains_3d_augmentation: _, out_shape = self.autofill_dim(inp, dim_range=(3, 5)) else: _, out_shape = self.autofill_dim(inp, dim_range=(2, 4)) params = self.forward_parameters(out_shape) else: raise ValueError("`params` must be provided whilst INPUT is not in data_keys.") outputs: List[Tensor] = [None] * len(_data_keys) # type: ignore self.return_label = self.return_label or label is not None or self.contains_label_operations(params) for idx, (arg, dcate) in enumerate(zip(args, _data_keys)): # Forward the param to all input data keys if dcate in self.extra_args: extra_args = self.extra_args[dcate] else: extra_args = {} if dcate == DataKey.INPUT: _inp = args[idx] _out = super().forward(_inp, label, params=params, extra_args=extra_args) # type: ignore self._transform_matrix = self.get_transformation_matrix(_inp, params=params) if self.return_label: _input, label = cast(Tuple[Tensor, Tensor], _out) else: _input = cast(Tensor, _out) outputs[idx] = _input # NOTE: Skip the rest here. continue # Using tensors straight-away if isinstance(arg, (Boxes,)): input = arg.data # all boxes are in (B, N, 4, 2) format now. else: input = arg for param in params: module = self.get_submodule(param.name) if isinstance(module, IntensityAugmentationBase2D) and dcate in DataKey \ and not isinstance(module, RandomErasing): pass # Do nothing elif isinstance(module, ImageSequential) and module.is_intensity_only() and dcate in DataKey: pass # Do nothing elif isinstance(module, VideoSequential) and dcate not in [DataKey.INPUT, DataKey.MASK]: batch_size: int = input.size(0) input = input.view(-1, *input.shape[2:]) input, label = ApplyInverse.apply_by_key( input, label, module, param, dcate, extra_args=extra_args) input = input.view(batch_size, -1, *input.shape[1:]) elif isinstance(module, PatchSequential): raise NotImplementedError("Geometric involved PatchSequential is not supported.") elif isinstance(module, (GeometricAugmentationBase2D, ImageSequential, RandomErasing)) \ and dcate in DataKey: input, label = ApplyInverse.apply_by_key( input, label, module, param, dcate, extra_args=extra_args) elif isinstance(module, (SequentialBase,)): raise ValueError(f"Unsupported Sequential {module}.") else: raise NotImplementedError(f"data_key {dcate} is not implemented for {module}.") if isinstance(arg, (Boxes,)): arg._data = input outputs[idx] = arg.to_tensor() else: outputs[idx] = input return self.__packup_output__(outputs, label)